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bulk-rna-seq-deseq2-analysis-with-omicverse

PyDESeq2 differential expression: ID mapping, DE testing, fold-change thresholding, and GSEA enrichment visualization in OmicVerse.

View Sourcescientific-computing
Starlitnightly
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Starlitnightly
Updated 3/12/2026
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quick start

Installation and usage

PyDESeq2 differential expression: ID mapping, DE testing, fold-change thresholding, and GSEA enrichment visualization in OmicVerse.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use bulk-rna-seq-deseq2-analysis-with-omicverse