skills.homes logoskills.homescapability registry
home/categories/scientific-computing/gptomics-bioskills-microbiome-functional-prediction-skill-md
cd ..
scientific-computingresearch

bio-microbiome-functional-prediction

Predict metagenome functional content from 16S rRNA marker gene data using PICRUSt2. Infer KEGG, MetaCyc, and EC abundances from ASV tables. Use when functional profiling is needed from 16S data without shotgun metagenomics sequencing.

View Sourcescientific-computing
GPTomics
maintainer
GPTomics
Updated 2/13/2026
Stars
471
Forks
81
quick start

Installation and usage

Predict metagenome functional content from 16S rRNA marker gene data using PICRUSt2. Infer KEGG, MetaCyc, and EC abundances from ASV tables. Use when functional profiling is needed from 16S data without shotgun metagenomics sequencing.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use bio-microbiome-functional-prediction