home/categories/bioinformatics/freedomintelligence-openclaw-medical-skills-skills-single-to-spatial-mapping-skill-md
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single2spatial-spatial-mapping

Map scRNA-seq atlases onto spatial transcriptomics slides using omicverse's Single2Spatial workflow for deep-forest training, spot-level assessment, and marker visualisation.

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Updated 3/8/2026
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quick start

Installation and usage

Map scRNA-seq atlases onto spatial transcriptomics slides using omicverse's Single2Spatial workflow for deep-forest training, spot-level assessment, and marker visualisation.

Installation
$ install --globalskills.sh
Usage

Once installed, you can use this skill by running the following command in your terminal:

skills use single2spatial-spatial-mapping