home/categories/bioinformatics/freedomintelligence-openclaw-medical-skills-skills-bio-variant-calling-structural-variant-calling-skill-md
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bio-variant-calling-structural-variant-calling
Call structural variants (SVs) from short-read sequencing using Manta, Delly, and LUMPY. Detects deletions, insertions, inversions, duplications, and translocations that are too large for standard SNV callers. Use when detecting structural variants from short-read data.
maintainer
FreedomIntelligence
Updated 3/8/2026
Stars
1987
Forks
270
quick start
Installation and usage
Call structural variants (SVs) from short-read sequencing using Manta, Delly, and LUMPY. Detects deletions, insertions, inversions, duplications, and translocations that are too large for standard SNV callers. Use when detecting structural variants from short-read data.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use bio-variant-calling-structural-variant-calling