home/categories/bioinformatics/aristoteleo-pantheonos-pantheon-factory-templates-skills-omics-upstream-processing-openst-skill-md
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openst-skills-index
Skills for Open-ST spatial transcriptomics data processing, from raw BCL files to spatially-resolved single-cell h5ad objects.
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aristoteleo
Updated 2/7/2026
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quick start
Installation and usage
Skills for Open-ST spatial transcriptomics data processing, from raw BCL files to spatially-resolved single-cell h5ad objects.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use openst-skills-index