home/categories/bioinformatics/aipoch-medical-research-skills-scientific-skills-evidence-insights-ena-database-skill-md
bioinformaticsresearch
ena-database
Access the European Nucleotide Archive (ENA) via REST APIs and FTP/Aspera to search and retrieve sequences, raw reads (FASTQ), assemblies, and metadata when you have accession IDs or need metadata-driven discovery for genomics pipelines.
maintainer
aipoch
Updated 3/23/2026
Stars
124
Forks
16
quick start
Installation and usage
Access the European Nucleotide Archive (ENA) via REST APIs and FTP/Aspera to search and retrieve sequences, raw reads (FASTQ), assemblies, and metadata when you have accession IDs or need metadata-driven discovery for genomics pipelines.
Installation
$ install --globalskills.sh
Usage
Once installed, you can use this skill by running the following command in your terminal:
skills use ena-database