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astronomy-physics
9

pydicom

Python package for working with DICOM files. It allows you to read, modify, and write DICOM data in a Pythonic way. Essential for medical imaging processing, clinical data extraction, and AI in radiology.

tondevrel
tondevrel
research
open
astronomy-physics
9

scikit-image

A collection of algorithms for image processing in Python. Built on NumPy, SciPy, and Cython. It focuses on scientific image analysis including segmentation, geometric transformations, color space manipulation, analysis, and filtering.

tondevrel
tondevrel
research
open
astronomy-physics
9

rasterio

Raster geospatial data processing — the Python interface to GDAL for satellite imagery, elevation models, and grid-based geographic analysis. Rasterio reads and writes georeferenced raster formats (GeoTIFF, NetCDF, JP2, PNG, JPEG2000), handles Coordinate Reference Systems (CRS) and reprojection, performs band math (NDVI, NDWI, EVI), clips/masks rasters with vector geometries, resamples grids, and supports memory-efficient windowed I/O for multi-gigabyte files. Use when: working with satellite imagery or aerial photos, processing Digital Elevation Models (DEM/DTM/DSM), computing spectral indices from multispectral data, clipping raster data to polygon boundaries, reprojecting between coordinate systems, performing spatial interpolation on gridded data, analyzing land cover or land use change over time, integrating raster data with vector data (geopandas/shapely), or any task involving georeferenced grid/pixel data as opposed to vector points/lines/polygons.

tondevrel
tondevrel
research
open
astronomy-physics
9

geopandas

Open source project to make working with geospatial data in python easier. Extends the datatypes used by pandas to allow spatial operations on geometric types. Built on top of Shapely, Fiona, and Pyproj. Use for reading and writing spatial formats (Shapefile, GeoJSON, GeoPackage, KML), performing spatial joins, coordinate system transformations (reprojecting), geometric analysis (buffers, centroids, convex hulls), thematic mapping (Choropleth maps), calculating spatial relationships (contains, overlaps, touches, within), working with OpenStreetMap data or satellite-derived vector data.

tondevrel
tondevrel
research
open
astronomy-physics
9

astropy

The core library for Astronomy and Astrophysics in Python. Provides data structures for coordinates, time, units, FITS files, and cosmological models. Essential for observational data reduction and theoretical astrophysics. Use when working with astronomical coordinates (RA/Dec), physical units, FITS files, time scales, WCS, cosmology, or astronomical tables.

tondevrel
tondevrel
research
open
scientific-computing
9

qutip

Quantum Toolbox in Python. Framework for simulating the dynamics of open quantum systems. Provides data structures for quantum objects (kets, bras, operators) and solvers for master equations, Monte Carlo trajectories, and time-dependent Hamiltonians. Use for quantum dynamics simulation, open quantum systems, master equations, quantum optics, cavity QED, Jaynes-Cummings model, Rabi oscillations, Wigner functions, quantum correlations, entanglement analysis, and quantum control.

tondevrel
tondevrel
research
open
scientific-computing
9

mne

Open-source Python package for exploring, visualizing, and analyzing human neurophysiological data including EEG, MEG, sEEG, and ECoG.

tondevrel
tondevrel
research
open
scientific-computing
9

ase

Atomic Simulation Environment - a set of tools for setting up, manipulating, running, visualizing, and analyzing atomistic simulations. Acts as a universal interface between Python and numerous quantum chemical and molecular dynamics codes. Use for building atomic structures, geometry optimization, molecular dynamics simulations, transition state searches (NEB), file format conversion (CIF, XYZ, POSCAR, PDB), electronic property calculations (DOS, band structures), and automating simulation workflows with DFT/MD codes like VASP, GPAW, Quantum ESPRESSO, LAMMPS.

tondevrel
tondevrel
research
open
scientific-computing
9

biopython

Comprehensive guide for Biopython - the premier Python library for computational biology and bioinformatics. Use for DNA/RNA/protein sequence analysis, file I/O (FASTA, FASTQ, GenBank, PDB), sequence alignment, BLAST searches, phylogenetic analysis, structure analysis, and NCBI database access.

tondevrel
tondevrel
research
open
scientific-computing
9

cobrapy

Constraints-Based Reconstruction and Analysis for Python. Used for modeling large-scale metabolic networks in microorganisms.

tondevrel
tondevrel
research
open
web3-tools
8

a2a-sdk-patterns

SDK installation and setup patterns for Agent-to-Agent Protocol across Python, TypeScript, Java, C#, and Go. Use when implementing A2A protocol, setting up SDKs, configuring authentication, or when user mentions SDK installation, language-specific setup, or A2A integration.

vanman2024
vanman2024
blockchain
open
knowledge-base
8

dev

Use this skill when working in the CPython repository for any development task - fixing bugs, adding features, understanding code, or making contributions. Provides codebase orientation and coordinates loading of specialized skills (build, style, docs) as your workflow progresses.

gpshead
gpshead
documentation
open
automation-tools
8

docs

Use this skill when editing documentation, working with files in Doc/, adding versionadded or versionchanged markers, creating NEWS entries for bug fixes or features, or building the HTML docs. Covers reStructuredText (.rst) format, documentation validation, and NEWS file requirements.

gpshead
gpshead
tools
open
documents
8

ppt-creator

Creates PowerPoint presentations via python-pptx. Use when building slides for presentations, proposals, or planning documents.

ssiumha
ssiumha
content-media
open
data-analysis
8

pandas-best-practices

Standards for efficient, readable, and performant data manipulation using Python's Pandas library.

mdbabumiamssm
mdbabumiamssm
data-ai
open
llm-ai
8

opentrons-protocol-agent

Generates executable Python protocols for Opentrons OT-2 and Flex robots from natural language descriptions.

mdbabumiamssm
mdbabumiamssm
data-ai
open
llm-ai
8

empathic-expressions

Intent-based code interpretation across all languages — SQL, Python, JS, YAML, Bash, and beyond

SimHacker
SimHacker
data-ai
open
llm-ai
8

claude-agent-sdk

Python으로 Claude Agent SDK 에이전트를 구축할 때 사용. 커스텀 도구, 훅, 서브에이전트, MCP 연동 코드를 생성합니다.

ssiumha
ssiumha
data-ai
open
backend
8

fastapi-modern-web-development

Production-grade FastAPI development with async patterns, Pydantic v2, dependency injection, ML/AI endpoint design, and modern Python best practices for building high-performance REST APIs

bobmatnyc
bobmatnyc
development
open
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